Cluster: Rep_2658_CGC35
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2658
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2658_c_0 | Rep_2658_c_0_2270 | 2708900 | 2710264 | - | 3.A.5.1.1 |
| STP | Rep_2658_c_0 | Rep_2658_c_0_2271 | 2710299 | 2710634 | - | Sigma70_r4 |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_2272 | 2710787 | 2712529 | - | PL37 |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_2273 | 2712890 | 2714947 | + | GH42 |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_2274 | 2715023 | 2717398 | - | CBM67 | GH78 |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_2275 | 2717507 | 2721289 | - | UvrD-helicase | PDDEXK_1 | AAA_19 | UvrD_C |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_2276 | 2721286 | 2721951 | - | UPF0029 | DUF1949 |
| TC | Rep_2658_c_0 | Rep_2658_c_0_2277 | 2721996 | 2723336 | - | 2.A.22.5.3 |
| TC | Rep_2658_c_0 | Rep_2658_c_0_2278 | 2723525 | 2724217 | - | 1.C.82.1.1 |
Gene ID: Rep_2658_c_0_2270
Type: TC
Location: 2708900 - 2710264 (-)
Type: TC
Location: 2708900 - 2710264 (-)
Gene ID: Rep_2658_c_0_2271
Type: STP
Location: 2710299 - 2710634 (-)
Type: STP
Location: 2710299 - 2710634 (-)
Gene ID: Rep_2658_c_0_2272
Type: CAZyme
Location: 2710787 - 2712529 (-)
Type: CAZyme
Location: 2710787 - 2712529 (-)
Gene ID: Rep_2658_c_0_2273
Type: CAZyme
Location: 2712890 - 2714947 (+)
Type: CAZyme
Location: 2712890 - 2714947 (+)
Gene ID: Rep_2658_c_0_2274
Type: CAZyme
Location: 2715023 - 2717398 (-)
Type: CAZyme
Location: 2715023 - 2717398 (-)
Gene ID: Rep_2658_c_0_2275
Type: pfam
Location: 2717507 - 2721289 (-)
Type: pfam
Location: 2717507 - 2721289 (-)
Gene ID: Rep_2658_c_0_2276
Type: pfam
Location: 2721286 - 2721951 (-)
Type: pfam
Location: 2721286 - 2721951 (-)
Gene ID: Rep_2658_c_0_2277
Type: TC
Location: 2721996 - 2723336 (-)
Type: TC
Location: 2721996 - 2723336 (-)
Gene ID: Rep_2658_c_0_2278
Type: TC
Location: 2723525 - 2724217 (-)
Type: TC
Location: 2723525 - 2724217 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp900546385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.