Cluster: Rep_2658_CGC30
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2658
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2658_c_0 | Rep_2658_c_0_1851 | 2220468 | 2221862 | - | 3.B.1.1.6 |
| TC | Rep_2658_c_0 | Rep_2658_c_0_1852 | 2221934 | 2223142 | - | 3.B.1.1.2 |
| TC | Rep_2658_c_0 | Rep_2658_c_0_1853 | 2223172 | 2223582 | - | 3.B.1.1.2 |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_1854 | 2223622 | 2224008 | - | OAD_gamma |
| TC | Rep_2658_c_0 | Rep_2658_c_0_1855 | 2224039 | 2225526 | - | 3.B.1.1.5 |
| NULL(UNKNOWN) | Rep_2658_c_0 | Rep_2658_c_0_1856 | 2225754 | 2226563 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_1857 | 2226816 | 2227625 | - | adh_short | adh_short_C2 | SDR |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_1858 | 2227642 | 2228457 | - | GH16 |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_1859 | 2228472 | 2229632 | - | MR_MLE_N | MR_MLE_C |
| TF | Rep_2658_c_0 | Rep_2658_c_0_1860 | 2229721 | 2230539 | + | HTH_AraC | HTH_AraC |
| TC | Rep_2658_c_0 | Rep_2658_c_0_1861 | 2230938 | 2231435 | + | 3.D.1.5.1 |
Gene ID: Rep_2658_c_0_1851
Type: TC
Location: 2220468 - 2221862 (-)
Type: TC
Location: 2220468 - 2221862 (-)
Gene ID: Rep_2658_c_0_1852
Type: TC
Location: 2221934 - 2223142 (-)
Type: TC
Location: 2221934 - 2223142 (-)
Gene ID: Rep_2658_c_0_1853
Type: TC
Location: 2223172 - 2223582 (-)
Type: TC
Location: 2223172 - 2223582 (-)
Gene ID: Rep_2658_c_0_1854
Type: pfam
Location: 2223622 - 2224008 (-)
Type: pfam
Location: 2223622 - 2224008 (-)
Gene ID: Rep_2658_c_0_1855
Type: TC
Location: 2224039 - 2225526 (-)
Type: TC
Location: 2224039 - 2225526 (-)
Gene ID: Rep_2658_c_0_1856
Type:
Location: 2225754 - 2226563 (-)
Type:
Location: 2225754 - 2226563 (-)
Gene ID: Rep_2658_c_0_1857
Type: pfam
Location: 2226816 - 2227625 (-)
Type: pfam
Location: 2226816 - 2227625 (-)
Gene ID: Rep_2658_c_0_1858
Type: CAZyme
Location: 2227642 - 2228457 (-)
Type: CAZyme
Location: 2227642 - 2228457 (-)
Gene ID: Rep_2658_c_0_1859
Type: pfam
Location: 2228472 - 2229632 (-)
Type: pfam
Location: 2228472 - 2229632 (-)
Gene ID: Rep_2658_c_0_1860
Type: TF
Location: 2229721 - 2230539 (+)
Type: TF
Location: 2229721 - 2230539 (+)
Gene ID: Rep_2658_c_0_1861
Type: TC
Location: 2230938 - 2231435 (+)
Type: TC
Location: 2230938 - 2231435 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp900546385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.