Cluster: Rep_2658_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2658
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2658_c_0 | Rep_2658_c_0_1496 | 1791475 | 1792209 | + | 1.C.109.1.4 |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_1497 | 1792280 | 1793107 | + | BacA |
| TF | Rep_2658_c_0 | Rep_2658_c_0_1498 | 1793104 | 1793925 | - | HTH_AraC | HTH_AraC |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_1499 | 1794051 | 1795790 | + | GH2 |
Gene ID: Rep_2658_c_0_1496
Type: TC
Location: 1791475 - 1792209 (+)
Type: TC
Location: 1791475 - 1792209 (+)
Gene ID: Rep_2658_c_0_1497
Type: pfam
Location: 1792280 - 1793107 (+)
Type: pfam
Location: 1792280 - 1793107 (+)
Gene ID: Rep_2658_c_0_1498
Type: TF
Location: 1793104 - 1793925 (-)
Type: TF
Location: 1793104 - 1793925 (-)
Gene ID: Rep_2658_c_0_1499
Type: CAZyme
Location: 1794051 - 1795790 (+)
Type: CAZyme
Location: 1794051 - 1795790 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp900546385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2658_c_0_1497 | vegetarian > vegan | 1.03507 | 0.03687 |