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Cluster: Rep_2658_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2658_c_0 Rep_2658_c_0_1428 1708846 1710819 - GH78
CAZyme Rep_2658_c_0 Rep_2658_c_0_1429 1710816 1713932 - GH106
TF Rep_2658_c_0 Rep_2658_c_0_1430 1714070 1714993 + HTH_AraC | HTH_AraC
TF Rep_2658_c_0 Rep_2658_c_0_1431 1715040 1715957 + HTH_AraC
CAZyme Rep_2658_c_0 Rep_2658_c_0_1432 1716345 1718834 - CBM13 | CBM13
pfam Rep_2658_c_0 Rep_2658_c_0_1433 1719084 1721810 - SLH | SLH
TC Rep_2658_c_0 Rep_2658_c_0_1434 1721854 1723038 - 3.A.1.122.2
TC Rep_2658_c_0 Rep_2658_c_0_1435 1723041 1723829 - 3.A.1.122.2
pfam Rep_2658_c_0 Rep_2658_c_0_1436 1723851 1725842 - HlyD_3 | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC Rep_2658_c_0 Rep_2658_c_0_1437 1726065 1727102 + 9.A.11.1.1
Gene ID: Rep_2658_c_0_1428
Type: CAZyme
Location: 1708846 - 1710819 (-)
Gene ID: Rep_2658_c_0_1429
Type: CAZyme
Location: 1710816 - 1713932 (-)
Gene ID: Rep_2658_c_0_1430
Type: TF
Location: 1714070 - 1714993 (+)
Gene ID: Rep_2658_c_0_1431
Type: TF
Location: 1715040 - 1715957 (+)
Gene ID: Rep_2658_c_0_1432
Type: CAZyme
Location: 1716345 - 1718834 (-)
Gene ID: Rep_2658_c_0_1433
Type: pfam
Location: 1719084 - 1721810 (-)
Gene ID: Rep_2658_c_0_1434
Type: TC
Location: 1721854 - 1723038 (-)
Gene ID: Rep_2658_c_0_1435
Type: TC
Location: 1723041 - 1723829 (-)
Gene ID: Rep_2658_c_0_1436
Type: pfam
Location: 1723851 - 1725842 (-)
Gene ID: Rep_2658_c_0_1437
Type: TC
Location: 1726065 - 1727102 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-382
→
Genus
UMGS882
→
Species
UMGS882 sp900546385

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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