Cluster: Rep_2658_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2658
- CGC Family ID: CGCFAM_06360
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_947 | 1178993 | 1180963 | - | GH36 |
| NULL(UNKNOWN) | Rep_2658_c_0 | Rep_2658_c_0_948 | 1180988 | 1181908 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_2658_c_0 | Rep_2658_c_0_949 | 1182050 | 1182865 | + | HTH_AraC |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_950 | 1182879 | 1184156 | - | GH175 |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_951 | 1184193 | 1185032 | - | DUF5991 |
| TC | Rep_2658_c_0 | Rep_2658_c_0_952 | 1185029 | 1186183 | - | 2.A.86.1.9 |
Gene ID: Rep_2658_c_0_947
Type: CAZyme
Location: 1178993 - 1180963 (-)
Type: CAZyme
Location: 1178993 - 1180963 (-)
Gene ID: Rep_2658_c_0_948
Type:
Location: 1180988 - 1181908 (-)
Type:
Location: 1180988 - 1181908 (-)
Gene ID: Rep_2658_c_0_949
Type: TF
Location: 1182050 - 1182865 (+)
Type: TF
Location: 1182050 - 1182865 (+)
Gene ID: Rep_2658_c_0_950
Type: CAZyme
Location: 1182879 - 1184156 (-)
Type: CAZyme
Location: 1182879 - 1184156 (-)
Gene ID: Rep_2658_c_0_951
Type: pfam
Location: 1184193 - 1185032 (-)
Type: pfam
Location: 1184193 - 1185032 (-)
Gene ID: Rep_2658_c_0_952
Type: TC
Location: 1185029 - 1186183 (-)
Type: TC
Location: 1185029 - 1186183 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp900546385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2658_c_0_950 | vegetarian > vegan | 1.54128 | 0.03677 |