Cluster: Rep_2658_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2658
- CGC Family ID: CGCFAM_00141
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2658_c_0 | Rep_2658_c_0_705 | 845438 | 846136 | - | 9.B.20.1.4 |
| TF | Rep_2658_c_0 | Rep_2658_c_0_706 | 846340 | 847137 | - | HTH_AraC |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_707 | 847257 | 849044 | + | GH127 |
| TF | Rep_2658_c_0 | Rep_2658_c_0_708 | 849473 | 850327 | + | HTH_AraC |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_709 | 850677 | 851243 | + | CBM67 |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_710 | 851258 | 852946 | + | GH78 |
Gene ID: Rep_2658_c_0_705
Type: TC
Location: 845438 - 846136 (-)
Type: TC
Location: 845438 - 846136 (-)
Gene ID: Rep_2658_c_0_706
Type: TF
Location: 846340 - 847137 (-)
Type: TF
Location: 846340 - 847137 (-)
Gene ID: Rep_2658_c_0_707
Type: CAZyme
Location: 847257 - 849044 (+)
Type: CAZyme
Location: 847257 - 849044 (+)
Gene ID: Rep_2658_c_0_708
Type: TF
Location: 849473 - 850327 (+)
Type: TF
Location: 849473 - 850327 (+)
Gene ID: Rep_2658_c_0_709
Type: CAZyme
Location: 850677 - 851243 (+)
Type: CAZyme
Location: 850677 - 851243 (+)
Gene ID: Rep_2658_c_0_710
Type: CAZyme
Location: 851258 - 852946 (+)
Type: CAZyme
Location: 851258 - 852946 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp900546385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.