Cluster: Rep_2658_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2658
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2658_c_0 | Rep_2658_c_0_54 | 41579 | 43375 | - | 3.A.1.111.2 |
| TC | Rep_2658_c_0 | Rep_2658_c_0_55 | 43379 | 45163 | - | 3.A.1.111.2 |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_56 | 45445 | 47655 | + | UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 |
| TF | Rep_2658_c_0 | Rep_2658_c_0_57 | 47985 | 49745 | + | MerR |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_58 | 49752 | 50972 | + | GH32 |
| TF | Rep_2658_c_0 | Rep_2658_c_0_59 | 51001 | 51846 | + | HTH_AraC | HTH_AraC |
| TC | Rep_2658_c_0 | Rep_2658_c_0_60 | 52025 | 52702 | + | 3.A.1.134.3 |
Gene ID: Rep_2658_c_0_54
Type: TC
Location: 41579 - 43375 (-)
Type: TC
Location: 41579 - 43375 (-)
Gene ID: Rep_2658_c_0_55
Type: TC
Location: 43379 - 45163 (-)
Type: TC
Location: 43379 - 45163 (-)
Gene ID: Rep_2658_c_0_56
Type: pfam
Location: 45445 - 47655 (+)
Type: pfam
Location: 45445 - 47655 (+)
Gene ID: Rep_2658_c_0_57
Type: TF
Location: 47985 - 49745 (+)
Type: TF
Location: 47985 - 49745 (+)
Gene ID: Rep_2658_c_0_58
Type: CAZyme
Location: 49752 - 50972 (+)
Type: CAZyme
Location: 49752 - 50972 (+)
Gene ID: Rep_2658_c_0_59
Type: TF
Location: 51001 - 51846 (+)
Type: TF
Location: 51001 - 51846 (+)
Gene ID: Rep_2658_c_0_60
Type: TC
Location: 52025 - 52702 (+)
Type: TC
Location: 52025 - 52702 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp900546385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.