Cluster: Rep_2642_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2642
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2642_c_19 | Rep_2642_c_19_7 | 5488 | 7104 | + | 3.D.10.1.2 |
| TC | Rep_2642_c_19 | Rep_2642_c_19_8 | 7128 | 8393 | + | 2.A.81.2.1 |
| pfam | Rep_2642_c_19 | Rep_2642_c_19_9 | 8535 | 10430 | + | Transket_pyr | Transketolase_C | DXP_synthase_N |
| pfam | Rep_2642_c_19 | Rep_2642_c_19_10 | 10555 | 11730 | - | malic | Malic_M |
| CAZyme | Rep_2642_c_19 | Rep_2642_c_19_11 | 11942 | 12730 | + | CE4 |
| CAZyme | Rep_2642_c_19 | Rep_2642_c_19_12 | 12727 | 13419 | + | CE4 |
Gene ID: Rep_2642_c_19_7
Type: TC
Location: 5488 - 7104 (+)
Type: TC
Location: 5488 - 7104 (+)
Gene ID: Rep_2642_c_19_8
Type: TC
Location: 7128 - 8393 (+)
Type: TC
Location: 7128 - 8393 (+)
Gene ID: Rep_2642_c_19_9
Type: pfam
Location: 8535 - 10430 (+)
Type: pfam
Location: 8535 - 10430 (+)
Gene ID: Rep_2642_c_19_10
Type: pfam
Location: 10555 - 11730 (-)
Type: pfam
Location: 10555 - 11730 (-)
Gene ID: Rep_2642_c_19_11
Type: CAZyme
Location: 11942 - 12730 (+)
Type: CAZyme
Location: 11942 - 12730 (+)
Gene ID: Rep_2642_c_19_12
Type: CAZyme
Location: 12727 - 13419 (+)
Type: CAZyme
Location: 12727 - 13419 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1002
Species
UMGS1002 sp900547565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.