Cluster: Rep_2642_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2642
- CGC Family ID: CGCFAM_05749
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2642_c_15 | Rep_2642_c_15_19 | 20174 | 20896 | + | 3.A.1.125.1 |
| pfam | Rep_2642_c_15 | Rep_2642_c_15_20 | 21003 | 22544 | - | Polysacc_synt |
| CAZyme | Rep_2642_c_15 | Rep_2642_c_15_21 | 22662 | 23777 | + | GH171 |
Gene ID: Rep_2642_c_15_19
Type: TC
Location: 20174 - 20896 (+)
Type: TC
Location: 20174 - 20896 (+)
Gene ID: Rep_2642_c_15_20
Type: pfam
Location: 21003 - 22544 (-)
Type: pfam
Location: 21003 - 22544 (-)
Gene ID: Rep_2642_c_15_21
Type: CAZyme
Location: 22662 - 23777 (+)
Type: CAZyme
Location: 22662 - 23777 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1002
Species
UMGS1002 sp900547565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.