Cluster: Rep_2642_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2642
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2642_c_14 | Rep_2642_c_14_9 | 7678 | 8400 | - | 3.A.1.105.2 |
| TF | Rep_2642_c_14 | Rep_2642_c_14_10 | 8397 | 8606 | - | SpoVT_AbrB |
| TC | Rep_2642_c_14 | Rep_2642_c_14_11 | 8844 | 11849 | - | 3.A.1.122.13 |
| NULL(UNKNOWN) | Rep_2642_c_14 | Rep_2642_c_14_12 | 12100 | 13185 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2642_c_14 | Rep_2642_c_14_13 | 13235 | 14563 | - | GH4 |
Gene ID: Rep_2642_c_14_9
Type: TC
Location: 7678 - 8400 (-)
Type: TC
Location: 7678 - 8400 (-)
Gene ID: Rep_2642_c_14_10
Type: TF
Location: 8397 - 8606 (-)
Type: TF
Location: 8397 - 8606 (-)
Gene ID: Rep_2642_c_14_11
Type: TC
Location: 8844 - 11849 (-)
Type: TC
Location: 8844 - 11849 (-)
Gene ID: Rep_2642_c_14_12
Type:
Location: 12100 - 13185 (+)
Type:
Location: 12100 - 13185 (+)
Gene ID: Rep_2642_c_14_13
Type: CAZyme
Location: 13235 - 14563 (-)
Type: CAZyme
Location: 13235 - 14563 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1002
Species
UMGS1002 sp900547565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.