Cluster: Rep_2642_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2642
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2642_c_3 | Rep_2642_c_3_16 | 18071 | 19069 | + | 9.B.146.1.6 |
| TC | Rep_2642_c_3 | Rep_2642_c_3_17 | 19095 | 20339 | + | 2.A.103.1.3 |
| pfam | Rep_2642_c_3 | Rep_2642_c_3_18 | 20370 | 20747 | + | Glyco_transf_28 |
| CAZyme | Rep_2642_c_3 | Rep_2642_c_3_19 | 20717 | 21463 | + | GT28 |
Gene ID: Rep_2642_c_3_16
Type: TC
Location: 18071 - 19069 (+)
Type: TC
Location: 18071 - 19069 (+)
Gene ID: Rep_2642_c_3_17
Type: TC
Location: 19095 - 20339 (+)
Type: TC
Location: 19095 - 20339 (+)
Gene ID: Rep_2642_c_3_18
Type: pfam
Location: 20370 - 20747 (+)
Type: pfam
Location: 20370 - 20747 (+)
Gene ID: Rep_2642_c_3_19
Type: CAZyme
Location: 20717 - 21463 (+)
Type: CAZyme
Location: 20717 - 21463 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1002
Species
UMGS1002 sp900547565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.