Cluster: Rep_2642_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2642
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2642_c_126 | Rep_2642_c_126_1 | 3 | 2681 | - | GH38 |
| pfam | Rep_2642_c_126 | Rep_2642_c_126_2 | 2730 | 3197 | - | DUF386 |
| pfam | Rep_2642_c_126 | Rep_2642_c_126_3 | 3290 | 4090 | - | APH |
| TC | Rep_2642_c_126 | Rep_2642_c_126_4 | 4361 | 5140 | + | 2.A.5.5.2 |
Gene ID: Rep_2642_c_126_1
Type: CAZyme
Location: 3 - 2681 (-)
Type: CAZyme
Location: 3 - 2681 (-)
Gene ID: Rep_2642_c_126_2
Type: pfam
Location: 2730 - 3197 (-)
Type: pfam
Location: 2730 - 3197 (-)
Gene ID: Rep_2642_c_126_3
Type: pfam
Location: 3290 - 4090 (-)
Type: pfam
Location: 3290 - 4090 (-)
Gene ID: Rep_2642_c_126_4
Type: TC
Location: 4361 - 5140 (+)
Type: TC
Location: 4361 - 5140 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1002
Species
UMGS1002 sp900547565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.