Cluster: Rep_2642_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2642
- CGC Family ID: CGCFAM_00709
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2642_c_115 | Rep_2642_c_115_1 | 359 | 2224 | - | GH127 |
| TF | Rep_2642_c_115 | Rep_2642_c_115_2 | 2448 | 2627 | + | SpoVT_AbrB |
| pfam | Rep_2642_c_115 | Rep_2642_c_115_3 | 2768 | 4177 | + | GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg |
| TC | Rep_2642_c_115 | Rep_2642_c_115_4 | 4174 | 4914 | + | 9.B.198.1.4 |
Gene ID: Rep_2642_c_115_1
Type: CAZyme
Location: 359 - 2224 (-)
Type: CAZyme
Location: 359 - 2224 (-)
Gene ID: Rep_2642_c_115_2
Type: TF
Location: 2448 - 2627 (+)
Type: TF
Location: 2448 - 2627 (+)
Gene ID: Rep_2642_c_115_3
Type: pfam
Location: 2768 - 4177 (+)
Type: pfam
Location: 2768 - 4177 (+)
Gene ID: Rep_2642_c_115_4
Type: TC
Location: 4174 - 4914 (+)
Type: TC
Location: 4174 - 4914 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1002
Species
UMGS1002 sp900547565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.