Cluster: Rep_2642_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2642
- CGC Family ID: CGCFAM_09000
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2642_c_0 | Rep_2642_c_0_15 | 16022 | 17899 | + | 9.B.18.2.1 |
| pfam | Rep_2642_c_0 | Rep_2642_c_0_16 | 18098 | 18832 | + | CpsB_CapC |
| TC | Rep_2642_c_0 | Rep_2642_c_0_17 | 18832 | 19608 | + | 8.A.3.2.3 |
| TC | Rep_2642_c_0 | Rep_2642_c_0_18 | 19605 | 20330 | + | 8.A.3.2.3 |
| CAZyme | Rep_2642_c_0 | Rep_2642_c_0_19 | 20501 | 21565 | + | GH179 |
Gene ID: Rep_2642_c_0_15
Type: TC
Location: 16022 - 17899 (+)
Type: TC
Location: 16022 - 17899 (+)
Gene ID: Rep_2642_c_0_16
Type: pfam
Location: 18098 - 18832 (+)
Type: pfam
Location: 18098 - 18832 (+)
Gene ID: Rep_2642_c_0_17
Type: TC
Location: 18832 - 19608 (+)
Type: TC
Location: 18832 - 19608 (+)
Gene ID: Rep_2642_c_0_18
Type: TC
Location: 19605 - 20330 (+)
Type: TC
Location: 19605 - 20330 (+)
Gene ID: Rep_2642_c_0_19
Type: CAZyme
Location: 20501 - 21565 (+)
Type: CAZyme
Location: 20501 - 21565 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1002
Species
UMGS1002 sp900547565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.