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Cluster: Rep_2631_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2631_c_3 Rep_2631_c_3_9 10617 12071 + 2.A.40.1.4
peptidase Rep_2631_c_3 Rep_2631_c_3_10 12229 13383 + S11.UPW
pfam Rep_2631_c_3 Rep_2631_c_3_11 13713 16199 + SLH | PepX_N
TC Rep_2631_c_3 Rep_2631_c_3_12 16384 17124 - 9.B.120.1.3
pfam Rep_2631_c_3 Rep_2631_c_3_13 17369 18541 + ANF_receptor | Peripla_BP_6
TC Rep_2631_c_3 Rep_2631_c_3_14 18707 19585 + 3.A.1.4.10
TC Rep_2631_c_3 Rep_2631_c_3_15 19600 20304 + 3.A.1.4.8
TC Rep_2631_c_3 Rep_2631_c_3_16 20274 20696 + 3.A.1.4.10
TC Rep_2631_c_3 Rep_2631_c_3_17 20693 21529 + 3.A.1.4.10
TC Rep_2631_c_3 Rep_2631_c_3_18 21526 22242 + 3.A.1.4.10
pfam Rep_2631_c_3 Rep_2631_c_3_19 22435 22860 - DZR
CAZyme Rep_2631_c_3 Rep_2631_c_3_20 22974 24371 - AA7
Gene ID: Rep_2631_c_3_9
Type: TC
Location: 10617 - 12071 (+)
Gene ID: Rep_2631_c_3_10
Type: peptidase
Location: 12229 - 13383 (+)
Gene ID: Rep_2631_c_3_11
Type: pfam
Location: 13713 - 16199 (+)
Gene ID: Rep_2631_c_3_12
Type: TC
Location: 16384 - 17124 (-)
Gene ID: Rep_2631_c_3_13
Type: pfam
Location: 17369 - 18541 (+)
Gene ID: Rep_2631_c_3_14
Type: TC
Location: 18707 - 19585 (+)
Gene ID: Rep_2631_c_3_15
Type: TC
Location: 19600 - 20304 (+)
Gene ID: Rep_2631_c_3_16
Type: TC
Location: 20274 - 20696 (+)
Gene ID: Rep_2631_c_3_17
Type: TC
Location: 20693 - 21529 (+)
Gene ID: Rep_2631_c_3_18
Type: TC
Location: 21526 - 22242 (+)
Gene ID: Rep_2631_c_3_19
Type: pfam
Location: 22435 - 22860 (-)
Gene ID: Rep_2631_c_3_20
Type: CAZyme
Location: 22974 - 24371 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS902
→
Species
UMGS902 sp003343845

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_2631_c_3_19 vegetarian > omnivore 3.62410 0.02181
Rep_2631_c_3_19 vegetarian > vegan 3.78152 0.00038

🧭 Explore Read Mapping of CGC

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