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Cluster: Rep_2631_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2631_c_2 Rep_2631_c_2_213 230886 231521 + 2.A.115.2.14
STP Rep_2631_c_2 Rep_2631_c_2_214 231518 232096 + NUDIX
pfam Rep_2631_c_2 Rep_2631_c_2_215 232134 232568 + YpsA
CAZyme Rep_2631_c_2 Rep_2631_c_2_216 232775 235624 + GH31
CAZyme Rep_2631_c_2 Rep_2631_c_2_217 235808 238603 + GH31
TF Rep_2631_c_2 Rep_2631_c_2_218 238681 239448 - 0035607 | 0036286
CAZyme Rep_2631_c_2 Rep_2631_c_2_219 239600 243172 + GH31
CAZyme Rep_2631_c_2 Rep_2631_c_2_220 243569 245941 + GH31_15
Gene ID: Rep_2631_c_2_213
Type: TC
Location: 230886 - 231521 (+)
Gene ID: Rep_2631_c_2_214
Type: STP
Location: 231518 - 232096 (+)
Gene ID: Rep_2631_c_2_215
Type: pfam
Location: 232134 - 232568 (+)
Gene ID: Rep_2631_c_2_216
Type: CAZyme
Location: 232775 - 235624 (+)
Gene ID: Rep_2631_c_2_217
Type: CAZyme
Location: 235808 - 238603 (+)
Gene ID: Rep_2631_c_2_218
Type: TF
Location: 238681 - 239448 (-)
Gene ID: Rep_2631_c_2_219
Type: CAZyme
Location: 239600 - 243172 (+)
Gene ID: Rep_2631_c_2_220
Type: CAZyme
Location: 243569 - 245941 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS902
→
Species
UMGS902 sp003343845

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_2631_c_2_215 vegetarian > omnivore 3.42846 0.02181
Rep_2631_c_2_215 vegetarian > vegan 4.08398 0.00038

🧭 Explore Read Mapping of CGC

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