dbCAN Logo

Cluster: Rep_2631_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2631_c_0 Rep_2631_c_0_295 351302 352594 + GH18
CAZyme Rep_2631_c_0 Rep_2631_c_0_296 352651 354501 - GH146
TF Rep_2631_c_0 Rep_2631_c_0_297 354685 355332 + HTH_AraC
CAZyme Rep_2631_c_0 Rep_2631_c_0_298 355660 358287 + GH43_26
pfam Rep_2631_c_0 Rep_2631_c_0_299 358386 359480 + Epimerase_2
NULL(UNKNOWN) Rep_2631_c_0 Rep_2631_c_0_300 359486 360703 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2631_c_0 Rep_2631_c_0_301 361281 362621 + 3.A.1.1.41
TC Rep_2631_c_0 Rep_2631_c_0_302 362692 363678 + 3.A.1.1.7
TC Rep_2631_c_0 Rep_2631_c_0_303 363692 364543 + 3.A.1.1.6
Gene ID: Rep_2631_c_0_295
Type: CAZyme
Location: 351302 - 352594 (+)
Gene ID: Rep_2631_c_0_296
Type: CAZyme
Location: 352651 - 354501 (-)
Gene ID: Rep_2631_c_0_297
Type: TF
Location: 354685 - 355332 (+)
Gene ID: Rep_2631_c_0_298
Type: CAZyme
Location: 355660 - 358287 (+)
Gene ID: Rep_2631_c_0_299
Type: pfam
Location: 358386 - 359480 (+)
Gene ID: Rep_2631_c_0_300
Type:
Location: 359486 - 360703 (+)
Gene ID: Rep_2631_c_0_301
Type: TC
Location: 361281 - 362621 (+)
Gene ID: Rep_2631_c_0_302
Type: TC
Location: 362692 - 363678 (+)
Gene ID: Rep_2631_c_0_303
Type: TC
Location: 363692 - 364543 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS902
→
Species
UMGS902 sp003343845

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_2631_c_0_295 vegetarian > omnivore 2.43491 0.02181
Rep_2631_c_0_295 vegetarian > vegan 4.13466 0.00038

🧭 Explore Read Mapping of CGC

← Back to Cluster List