Cluster: Rep_2631_CGC17
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2631
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2631_c_6 | Rep_2631_c_6_45 | 36510 | 37598 | - | 3.A.1.2.7 |
| TC | Rep_2631_c_6 | Rep_2631_c_6_46 | 37671 | 38654 | - | 3.A.1.2.1 |
| TC | Rep_2631_c_6 | Rep_2631_c_6_47 | 38666 | 40171 | - | 3.A.1.2.3 |
| TF | Rep_2631_c_6 | Rep_2631_c_6_48 | 40600 | 41616 | - | LacI |
| CAZyme | Rep_2631_c_6 | Rep_2631_c_6_49 | 41817 | 43253 | - | GH43_33 |
| pfam | Rep_2631_c_6 | Rep_2631_c_6_50 | 43394 | 44938 | - | SLH | SLH |
| CAZyme | Rep_2631_c_6 | Rep_2631_c_6_51 | 44975 | 46801 | - | GH43_33 |
| CAZyme | Rep_2631_c_6 | Rep_2631_c_6_52 | 46798 | 48543 | - | GH129 |
Gene ID: Rep_2631_c_6_45
Type: TC
Location: 36510 - 37598 (-)
Type: TC
Location: 36510 - 37598 (-)
Gene ID: Rep_2631_c_6_46
Type: TC
Location: 37671 - 38654 (-)
Type: TC
Location: 37671 - 38654 (-)
Gene ID: Rep_2631_c_6_47
Type: TC
Location: 38666 - 40171 (-)
Type: TC
Location: 38666 - 40171 (-)
Gene ID: Rep_2631_c_6_48
Type: TF
Location: 40600 - 41616 (-)
Type: TF
Location: 40600 - 41616 (-)
Gene ID: Rep_2631_c_6_49
Type: CAZyme
Location: 41817 - 43253 (-)
Type: CAZyme
Location: 41817 - 43253 (-)
Gene ID: Rep_2631_c_6_50
Type: pfam
Location: 43394 - 44938 (-)
Type: pfam
Location: 43394 - 44938 (-)
Gene ID: Rep_2631_c_6_51
Type: CAZyme
Location: 44975 - 46801 (-)
Type: CAZyme
Location: 44975 - 46801 (-)
Gene ID: Rep_2631_c_6_52
Type: CAZyme
Location: 46798 - 48543 (-)
Type: CAZyme
Location: 46798 - 48543 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS902
Species
UMGS902 sp003343845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.