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Cluster: Rep_2631_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2631_c_5 Rep_2631_c_5_368 461568 464195 + 3.A.3.2.28
pfam Rep_2631_c_5 Rep_2631_c_5_369 464319 465839 - DUF4340
pfam Rep_2631_c_5 Rep_2631_c_5_370 465836 467350 - ABC_transp_aux
TC Rep_2631_c_5 Rep_2631_c_5_371 467363 468070 - 3.A.1.132.1
TC Rep_2631_c_5 Rep_2631_c_5_372 468070 469008 - 3.A.1.132.9
TF Rep_2631_c_5 Rep_2631_c_5_373 469215 470072 - HTH_AraC
pfam Rep_2631_c_5 Rep_2631_c_5_374 470337 473426 + DUF5107
CAZyme Rep_2631_c_5 Rep_2631_c_5_375 473493 474617 + GH5_13
Gene ID: Rep_2631_c_5_368
Type: TC
Location: 461568 - 464195 (+)
Gene ID: Rep_2631_c_5_369
Type: pfam
Location: 464319 - 465839 (-)
Gene ID: Rep_2631_c_5_370
Type: pfam
Location: 465836 - 467350 (-)
Gene ID: Rep_2631_c_5_371
Type: TC
Location: 467363 - 468070 (-)
Gene ID: Rep_2631_c_5_372
Type: TC
Location: 468070 - 469008 (-)
Gene ID: Rep_2631_c_5_373
Type: TF
Location: 469215 - 470072 (-)
Gene ID: Rep_2631_c_5_374
Type: pfam
Location: 470337 - 473426 (+)
Gene ID: Rep_2631_c_5_375
Type: CAZyme
Location: 473493 - 474617 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS902
→
Species
UMGS902 sp003343845

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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