Cluster: Rep_2631_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2631
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2631_c_4 | Rep_2631_c_4_125 | 136637 | 137287 | + | 9.B.18.1.1 |
| CAZyme | Rep_2631_c_4 | Rep_2631_c_4_126 | 137284 | 138507 | + | GT4 |
| CAZyme | Rep_2631_c_4 | Rep_2631_c_4_127 | 138504 | 139577 | + | GT4 |
Gene ID: Rep_2631_c_4_125
Type: TC
Location: 136637 - 137287 (+)
Type: TC
Location: 136637 - 137287 (+)
Gene ID: Rep_2631_c_4_126
Type: CAZyme
Location: 137284 - 138507 (+)
Type: CAZyme
Location: 137284 - 138507 (+)
Gene ID: Rep_2631_c_4_127
Type: CAZyme
Location: 138504 - 139577 (+)
Type: CAZyme
Location: 138504 - 139577 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS902
Species
UMGS902 sp003343845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2631_c_4_127 | vegetarian > omnivore | 3.04489 | 0.02181 |
| Rep_2631_c_4_127 | vegetarian > vegan | 1.15879 | 0.00038 |