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Cluster: Rep_2631_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2631_c_3 Rep_2631_c_3_137 170143 171504 + 2.A.26.1.3
TF Rep_2631_c_3 Rep_2631_c_3_138 171674 172147 + MarR
TC Rep_2631_c_3 Rep_2631_c_3_139 172144 173913 + 3.A.1.135.6
TC Rep_2631_c_3 Rep_2631_c_3_140 173915 175711 + 3.A.1.135.6
pfam Rep_2631_c_3 Rep_2631_c_3_141 175761 176399 - G3P_acyltransf
CAZyme Rep_2631_c_3 Rep_2631_c_3_142 176396 177502 - GT28
STP Rep_2631_c_3 Rep_2631_c_3_143 177468 178034 - HD
STP Rep_2631_c_3 Rep_2631_c_3_144 178364 179170 + SBP_bac_1
TC Rep_2631_c_3 Rep_2631_c_3_145 179429 180298 + 3.A.1.7.1
TC Rep_2631_c_3 Rep_2631_c_3_146 180300 181163 + 3.A.1.7.2
TC Rep_2631_c_3 Rep_2631_c_3_147 181160 181912 + 3.A.1.7.5
Gene ID: Rep_2631_c_3_137
Type: TC
Location: 170143 - 171504 (+)
Gene ID: Rep_2631_c_3_138
Type: TF
Location: 171674 - 172147 (+)
Gene ID: Rep_2631_c_3_139
Type: TC
Location: 172144 - 173913 (+)
Gene ID: Rep_2631_c_3_140
Type: TC
Location: 173915 - 175711 (+)
Gene ID: Rep_2631_c_3_141
Type: pfam
Location: 175761 - 176399 (-)
Gene ID: Rep_2631_c_3_142
Type: CAZyme
Location: 176396 - 177502 (-)
Gene ID: Rep_2631_c_3_143
Type: STP
Location: 177468 - 178034 (-)
Gene ID: Rep_2631_c_3_144
Type: STP
Location: 178364 - 179170 (+)
Gene ID: Rep_2631_c_3_145
Type: TC
Location: 179429 - 180298 (+)
Gene ID: Rep_2631_c_3_146
Type: TC
Location: 180300 - 181163 (+)
Gene ID: Rep_2631_c_3_147
Type: TC
Location: 181160 - 181912 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS902
→
Species
UMGS902 sp003343845

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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