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Cluster: Rep_2631_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2631_c_0 Rep_2631_c_0_161 192438 193154 - GT2
pfam Rep_2631_c_0 Rep_2631_c_0_162 193155 193988 - Methyltransf_11 | Methyltransf_25 | Methyltransf_31 | Zn_ribbon_RlmA
STP Rep_2631_c_0 Rep_2631_c_0_163 194091 194360 + FeoA
TC Rep_2631_c_0 Rep_2631_c_0_164 194476 196032 + 9.A.8.1.11
pfam Rep_2631_c_0 Rep_2631_c_0_165 196151 197158 + AsnA
TC Rep_2631_c_0 Rep_2631_c_0_166 197483 198490 + 3.A.1.24.2
TC Rep_2631_c_0 Rep_2631_c_0_167 198480 199145 + 3.A.1.24.5
TC Rep_2631_c_0 Rep_2631_c_0_168 199201 200010 + 3.A.1.24.5
pfam Rep_2631_c_0 Rep_2631_c_0_169 200477 201037 - TetR_C_8
TC Rep_2631_c_0 Rep_2631_c_0_170 201197 202855 + 4.C.1.1.14
TC Rep_2631_c_0 Rep_2631_c_0_171 202936 203568 - 1.A.62.2.1
Gene ID: Rep_2631_c_0_161
Type: CAZyme
Location: 192438 - 193154 (-)
Gene ID: Rep_2631_c_0_162
Type: pfam
Location: 193155 - 193988 (-)
Gene ID: Rep_2631_c_0_163
Type: STP
Location: 194091 - 194360 (+)
Gene ID: Rep_2631_c_0_164
Type: TC
Location: 194476 - 196032 (+)
Gene ID: Rep_2631_c_0_165
Type: pfam
Location: 196151 - 197158 (+)
Gene ID: Rep_2631_c_0_166
Type: TC
Location: 197483 - 198490 (+)
Gene ID: Rep_2631_c_0_167
Type: TC
Location: 198480 - 199145 (+)
Gene ID: Rep_2631_c_0_168
Type: TC
Location: 199201 - 200010 (+)
Gene ID: Rep_2631_c_0_169
Type: pfam
Location: 200477 - 201037 (-)
Gene ID: Rep_2631_c_0_170
Type: TC
Location: 201197 - 202855 (+)
Gene ID: Rep_2631_c_0_171
Type: TC
Location: 202936 - 203568 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS902
→
Species
UMGS902 sp003343845

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_2631_c_0_164 vegetarian > omnivore 3.28070 0.02181
Rep_2631_c_0_164 vegetarian > vegan 3.30257 0.00038

🧭 Explore Read Mapping of CGC

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