dbCAN HGM

Cluster: Rep_2616_CGC7

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_2616_c_0	Rep_2616_c_0_597	637679	639730	+	3.A.2.2.2
TC	Rep_2616_c_0	Rep_2616_c_0_598	639744	640223	+	3.A.2.2.2
pfam	Rep_2616_c_0	Rep_2616_c_0_599	640229	640816	+	vATP-synt_E
pfam	Rep_2616_c_0	Rep_2616_c_0_600	640818	641813	+	vATP-synt_AC39
TC	Rep_2616_c_0	Rep_2616_c_0_601	641806	642156	+	3.A.2.2.2
TC	Rep_2616_c_0	Rep_2616_c_0_602	642161	643942	+	3.A.2.2.2
TC	Rep_2616_c_0	Rep_2616_c_0_603	643942	645330	+	3.A.2.2.2
TC	Rep_2616_c_0	Rep_2616_c_0_604	645323	645955	+	3.A.2.2.2
CAZyme	Rep_2616_c_0	Rep_2616_c_0_605	646473	648899	-	GH3
TC	Rep_2616_c_0	Rep_2616_c_0_606	649128	649868	+	4.F.1.1.7

Gene ID: Rep_2616_c_0_597
Type: TC
Location: 637679 - 639730 (+)

Gene ID: Rep_2616_c_0_598
Type: TC
Location: 639744 - 640223 (+)

Gene ID: Rep_2616_c_0_599
Type: pfam
Location: 640229 - 640816 (+)

Gene ID: Rep_2616_c_0_600
Type: pfam
Location: 640818 - 641813 (+)

Gene ID: Rep_2616_c_0_601
Type: TC
Location: 641806 - 642156 (+)

Gene ID: Rep_2616_c_0_602
Type: TC
Location: 642161 - 643942 (+)

Gene ID: Rep_2616_c_0_603
Type: TC
Location: 643942 - 645330 (+)

Gene ID: Rep_2616_c_0_604
Type: TC
Location: 645323 - 645955 (+)

Gene ID: Rep_2616_c_0_605
Type: CAZyme
Location: 646473 - 648899 (-)

Gene ID: Rep_2616_c_0_606
Type: TC
Location: 649128 - 649868 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2616_c_0_597	vegetarian > vegan	2.54796	0.01332
Rep_2616_c_0_598	vegetarian > vegan	19.36319	0.01332
Rep_2616_c_0_599	vegetarian > omnivore	1.58437	0.03764
Rep_2616_c_0_599	vegetarian > vegan	19.86051	0.01332
Rep_2616_c_0_601	vegetarian > vegan	19.92414	0.01332
Rep_2616_c_0_605	vegetarian > vegan	1.70161	0.01332
Rep_2616_c_0_606	vegetarian > vegan	1.84193	0.01332