Cluster: Rep_2616_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2616
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2616_c_0 | Rep_2616_c_0_416 | 435034 | 436650 | + | GH27 |
| CAZyme | Rep_2616_c_0 | Rep_2616_c_0_417 | 436707 | 438368 | - | GH36 |
| pfam | Rep_2616_c_0 | Rep_2616_c_0_418 | 438391 | 439665 | - | Adenylsucc_synt |
| pfam | Rep_2616_c_0 | Rep_2616_c_0_419 | 439766 | 440548 | - | Amidohydro_2 |
| TC | Rep_2616_c_0 | Rep_2616_c_0_420 | 440709 | 442361 | + | 2.A.2.3.9 |
Gene ID: Rep_2616_c_0_416
Type: CAZyme
Location: 435034 - 436650 (+)
Type: CAZyme
Location: 435034 - 436650 (+)
Gene ID: Rep_2616_c_0_417
Type: CAZyme
Location: 436707 - 438368 (-)
Type: CAZyme
Location: 436707 - 438368 (-)
Gene ID: Rep_2616_c_0_418
Type: pfam
Location: 438391 - 439665 (-)
Type: pfam
Location: 438391 - 439665 (-)
Gene ID: Rep_2616_c_0_419
Type: pfam
Location: 439766 - 440548 (-)
Type: pfam
Location: 439766 - 440548 (-)
Gene ID: Rep_2616_c_0_420
Type: TC
Location: 440709 - 442361 (+)
Type: TC
Location: 440709 - 442361 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
CAG-349
Species
CAG-349 sp003539515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2616_c_0_417 | vegetarian > vegan | 1.58604 | 0.01332 |
| Rep_2616_c_0_420 | vegetarian > vegan | 2.93757 | 0.01332 |