Cluster: Rep_2616_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2616
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2616_c_0 | Rep_2616_c_0_54 | 56590 | 58317 | + | GT2 |
| CAZyme | Rep_2616_c_0 | Rep_2616_c_0_55 | 58325 | 59434 | + | GT4 |
| CAZyme | Rep_2616_c_0 | Rep_2616_c_0_56 | 59431 | 60339 | + | GT111 |
| TC | Rep_2616_c_0 | Rep_2616_c_0_57 | 60404 | 61303 | - | 3.A.1.103.5 |
| pfam | Rep_2616_c_0 | Rep_2616_c_0_58 | 61316 | 62152 | - | ABC2_membrane |
| pfam | Rep_2616_c_0 | Rep_2616_c_0_59 | 62264 | 63193 | - | DAGK_cat |
| TC | Rep_2616_c_0 | Rep_2616_c_0_60 | 63373 | 64104 | + | 9.B.18.1.2 |
Gene ID: Rep_2616_c_0_54
Type: CAZyme
Location: 56590 - 58317 (+)
Type: CAZyme
Location: 56590 - 58317 (+)
Gene ID: Rep_2616_c_0_55
Type: CAZyme
Location: 58325 - 59434 (+)
Type: CAZyme
Location: 58325 - 59434 (+)
Gene ID: Rep_2616_c_0_56
Type: CAZyme
Location: 59431 - 60339 (+)
Type: CAZyme
Location: 59431 - 60339 (+)
Gene ID: Rep_2616_c_0_57
Type: TC
Location: 60404 - 61303 (-)
Type: TC
Location: 60404 - 61303 (-)
Gene ID: Rep_2616_c_0_58
Type: pfam
Location: 61316 - 62152 (-)
Type: pfam
Location: 61316 - 62152 (-)
Gene ID: Rep_2616_c_0_59
Type: pfam
Location: 62264 - 63193 (-)
Type: pfam
Location: 62264 - 63193 (-)
Gene ID: Rep_2616_c_0_60
Type: TC
Location: 63373 - 64104 (+)
Type: TC
Location: 63373 - 64104 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
CAG-349
Species
CAG-349 sp003539515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.