Cluster: Rep_2605_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2605
- CGC Family ID: CGCFAM_08071
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2605_c_21 | Rep_2605_c_21_4 | 5338 | 6450 | + | GT4 |
| CAZyme | Rep_2605_c_21 | Rep_2605_c_21_5 | 6447 | 7358 | + | GT111 |
| TC | Rep_2605_c_21 | Rep_2605_c_21_6 | 7444 | 8322 | - | 3.A.1.103.5 |
| TC | Rep_2605_c_21 | Rep_2605_c_21_7 | 8322 | 9086 | - | 3.A.1.103.4 |
| pfam | Rep_2605_c_21 | Rep_2605_c_21_8 | 9278 | 10162 | - | DAGK_cat |
| TC | Rep_2605_c_21 | Rep_2605_c_21_9 | 10315 | 10971 | + | 9.B.18.1.3 |
Gene ID: Rep_2605_c_21_4
Type: CAZyme
Location: 5338 - 6450 (+)
Type: CAZyme
Location: 5338 - 6450 (+)
Gene ID: Rep_2605_c_21_5
Type: CAZyme
Location: 6447 - 7358 (+)
Type: CAZyme
Location: 6447 - 7358 (+)
Gene ID: Rep_2605_c_21_6
Type: TC
Location: 7444 - 8322 (-)
Type: TC
Location: 7444 - 8322 (-)
Gene ID: Rep_2605_c_21_7
Type: TC
Location: 8322 - 9086 (-)
Type: TC
Location: 8322 - 9086 (-)
Gene ID: Rep_2605_c_21_8
Type: pfam
Location: 9278 - 10162 (-)
Type: pfam
Location: 9278 - 10162 (-)
Gene ID: Rep_2605_c_21_9
Type: TC
Location: 10315 - 10971 (+)
Type: TC
Location: 10315 - 10971 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp944349635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.