Cluster: Rep_2605_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2605
- CGC Family ID: CGCFAM_00268
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2605_c_8 | Rep_2605_c_8_30 | 30887 | 31651 | - | CE4 |
| peptidase | Rep_2605_c_8 | Rep_2605_c_8_31 | 31682 | 32956 | + | M16.UNB |
| pfam | Rep_2605_c_8 | Rep_2605_c_8_32 | 32979 | 33416 | + | dUTPase_2 |
| TC | Rep_2605_c_8 | Rep_2605_c_8_33 | 33606 | 37331 | + | 3.A.12.1.1 |
| pfam | Rep_2605_c_8 | Rep_2605_c_8_34 | 37400 | 38707 | + | UPF0004 | Radical_SAM | TRAM_2 |
| TC | Rep_2605_c_8 | Rep_2605_c_8_35 | 38704 | 40812 | + | 4.F.1.1.7 |
Gene ID: Rep_2605_c_8_30
Type: CAZyme
Location: 30887 - 31651 (-)
Type: CAZyme
Location: 30887 - 31651 (-)
Gene ID: Rep_2605_c_8_31
Type: peptidase
Location: 31682 - 32956 (+)
Type: peptidase
Location: 31682 - 32956 (+)
Gene ID: Rep_2605_c_8_32
Type: pfam
Location: 32979 - 33416 (+)
Type: pfam
Location: 32979 - 33416 (+)
Gene ID: Rep_2605_c_8_33
Type: TC
Location: 33606 - 37331 (+)
Type: TC
Location: 33606 - 37331 (+)
Gene ID: Rep_2605_c_8_34
Type: pfam
Location: 37400 - 38707 (+)
Type: pfam
Location: 37400 - 38707 (+)
Gene ID: Rep_2605_c_8_35
Type: TC
Location: 38704 - 40812 (+)
Type: TC
Location: 38704 - 40812 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp944349635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.