Cluster: Rep_2605_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2605
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2605_c_7 | Rep_2605_c_7_39 | 47460 | 48989 | + | GH77 |
| NULL(UNKNOWN) | Rep_2605_c_7 | Rep_2605_c_7_40 | 48986 | 49480 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2605_c_7 | Rep_2605_c_7_41 | 49547 | 49786 | + | PP-binding |
| TC | Rep_2605_c_7 | Rep_2605_c_7_42 | 49873 | 50796 | + | 3.A.1.105.3 |
Gene ID: Rep_2605_c_7_39
Type: CAZyme
Location: 47460 - 48989 (+)
Type: CAZyme
Location: 47460 - 48989 (+)
Gene ID: Rep_2605_c_7_40
Type:
Location: 48986 - 49480 (+)
Type:
Location: 48986 - 49480 (+)
Gene ID: Rep_2605_c_7_41
Type: pfam
Location: 49547 - 49786 (+)
Type: pfam
Location: 49547 - 49786 (+)
Gene ID: Rep_2605_c_7_42
Type: TC
Location: 49873 - 50796 (+)
Type: TC
Location: 49873 - 50796 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp944349635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.