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Cluster: Rep_2605_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2605_c_7 Rep_2605_c_7_13 16855 18360 + 2.A.66.1.33
TC Rep_2605_c_7 Rep_2605_c_7_14 18694 19593 - 3.A.1.5.15
TC Rep_2605_c_7 Rep_2605_c_7_15 19577 20566 - 3.A.1.5.39
TC Rep_2605_c_7 Rep_2605_c_7_16 20618 22249 - 3.A.1.5.34
TC Rep_2605_c_7 Rep_2605_c_7_17 22246 22977 - 3.A.1.5.27
TC Rep_2605_c_7 Rep_2605_c_7_18 22970 23887 - 3.A.1.5.2
CAZyme Rep_2605_c_7 Rep_2605_c_7_19 24182 26725 + GH2
TC Rep_2605_c_7 Rep_2605_c_7_20 27002 29662 + 3.A.3.5.15
Gene ID: Rep_2605_c_7_13
Type: TC
Location: 16855 - 18360 (+)
Gene ID: Rep_2605_c_7_14
Type: TC
Location: 18694 - 19593 (-)
Gene ID: Rep_2605_c_7_15
Type: TC
Location: 19577 - 20566 (-)
Gene ID: Rep_2605_c_7_16
Type: TC
Location: 20618 - 22249 (-)
Gene ID: Rep_2605_c_7_17
Type: TC
Location: 22246 - 22977 (-)
Gene ID: Rep_2605_c_7_18
Type: TC
Location: 22970 - 23887 (-)
Gene ID: Rep_2605_c_7_19
Type: CAZyme
Location: 24182 - 26725 (+)
Gene ID: Rep_2605_c_7_20
Type: TC
Location: 27002 - 29662 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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