Cluster: Rep_2605_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_2605
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2605_c_2 | Rep_2605_c_2_8 | 4841 | 6898 | - | 2.A.1.2.88 |
| CAZyme | Rep_2605_c_2 | Rep_2605_c_2_9 | 7066 | 8868 | - | GH13_39 |
| CAZyme | Rep_2605_c_2 | Rep_2605_c_2_10 | 8932 | 11361 | - | GT35 |
| CAZyme | Rep_2605_c_2 | Rep_2605_c_2_11 | 11565 | 12986 | - | GT5 |
| pfam | Rep_2605_c_2 | Rep_2605_c_2_12 | 13023 | 14138 | - | NTP_transferase | Hexapep_GlmU |
| pfam | Rep_2605_c_2 | Rep_2605_c_2_13 | 14149 | 15354 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | Rep_2605_c_2 | Rep_2605_c_2_14 | 15354 | 17243 | - | CBM48 | GH13_9 |
Gene ID: Rep_2605_c_2_8
Type: TC
Location: 4841 - 6898 (-)
Type: TC
Location: 4841 - 6898 (-)
Gene ID: Rep_2605_c_2_9
Type: CAZyme
Location: 7066 - 8868 (-)
Type: CAZyme
Location: 7066 - 8868 (-)
Gene ID: Rep_2605_c_2_10
Type: CAZyme
Location: 8932 - 11361 (-)
Type: CAZyme
Location: 8932 - 11361 (-)
Gene ID: Rep_2605_c_2_11
Type: CAZyme
Location: 11565 - 12986 (-)
Type: CAZyme
Location: 11565 - 12986 (-)
Gene ID: Rep_2605_c_2_12
Type: pfam
Location: 13023 - 14138 (-)
Type: pfam
Location: 13023 - 14138 (-)
Gene ID: Rep_2605_c_2_13
Type: pfam
Location: 14149 - 15354 (-)
Type: pfam
Location: 14149 - 15354 (-)
Gene ID: Rep_2605_c_2_14
Type: CAZyme
Location: 15354 - 17243 (-)
Type: CAZyme
Location: 15354 - 17243 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp944349635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.