Cluster: Rep_2603_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_2603
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2603_c_9 | Rep_2603_c_9_25 | 32735 | 34627 | + | GH13_9 |
| pfam | Rep_2603_c_9 | Rep_2603_c_9_26 | 34624 | 35829 | + | NTP_transferase | Hexapep_GlmU |
| pfam | Rep_2603_c_9 | Rep_2603_c_9_27 | 35840 | 36955 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | Rep_2603_c_9 | Rep_2603_c_9_28 | 37011 | 38435 | + | GT5 |
| CAZyme | Rep_2603_c_9 | Rep_2603_c_9_29 | 38558 | 40987 | + | GT35 |
| CAZyme | Rep_2603_c_9 | Rep_2603_c_9_30 | 41047 | 42876 | + | GH13_39 |
| TC | Rep_2603_c_9 | Rep_2603_c_9_31 | 43021 | 45195 | + | 2.A.1.2.88 |
Gene ID: Rep_2603_c_9_25
Type: CAZyme
Location: 32735 - 34627 (+)
Type: CAZyme
Location: 32735 - 34627 (+)
Gene ID: Rep_2603_c_9_26
Type: pfam
Location: 34624 - 35829 (+)
Type: pfam
Location: 34624 - 35829 (+)
Gene ID: Rep_2603_c_9_27
Type: pfam
Location: 35840 - 36955 (+)
Type: pfam
Location: 35840 - 36955 (+)
Gene ID: Rep_2603_c_9_28
Type: CAZyme
Location: 37011 - 38435 (+)
Type: CAZyme
Location: 37011 - 38435 (+)
Gene ID: Rep_2603_c_9_29
Type: CAZyme
Location: 38558 - 40987 (+)
Type: CAZyme
Location: 38558 - 40987 (+)
Gene ID: Rep_2603_c_9_30
Type: CAZyme
Location: 41047 - 42876 (+)
Type: CAZyme
Location: 41047 - 42876 (+)
Gene ID: Rep_2603_c_9_31
Type: TC
Location: 43021 - 45195 (+)
Type: TC
Location: 43021 - 45195 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp900554085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.