Cluster: Rep_2603_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2603
- CGC Family ID: CGCFAM_01463
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2603_c_1 | Rep_2603_c_1_77 | 87298 | 88827 | + | GH77 |
| NULL(UNKNOWN) | Rep_2603_c_1 | Rep_2603_c_1_78 | 88824 | 89333 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2603_c_1 | Rep_2603_c_1_79 | 89453 | 89695 | + | 3.D.1.6.4 |
| TC | Rep_2603_c_1 | Rep_2603_c_1_80 | 89715 | 90671 | + | 3.A.1.105.13 |
| TC | Rep_2603_c_1 | Rep_2603_c_1_81 | 90673 | 91647 | + | 3.A.1.130.1 |
Gene ID: Rep_2603_c_1_77
Type: CAZyme
Location: 87298 - 88827 (+)
Type: CAZyme
Location: 87298 - 88827 (+)
Gene ID: Rep_2603_c_1_78
Type:
Location: 88824 - 89333 (+)
Type:
Location: 88824 - 89333 (+)
Gene ID: Rep_2603_c_1_79
Type: TC
Location: 89453 - 89695 (+)
Type: TC
Location: 89453 - 89695 (+)
Gene ID: Rep_2603_c_1_80
Type: TC
Location: 89715 - 90671 (+)
Type: TC
Location: 89715 - 90671 (+)
Gene ID: Rep_2603_c_1_81
Type: TC
Location: 90673 - 91647 (+)
Type: TC
Location: 90673 - 91647 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp900554085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.