Cluster: Rep_2603_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2603
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2603_c_1 | Rep_2603_c_1_15 | 17025 | 18806 | + | 3.A.1.2.17 |
| TC | Rep_2603_c_1 | Rep_2603_c_1_16 | 18808 | 19959 | + | 3.A.1.2.10 |
| TC | Rep_2603_c_1 | Rep_2603_c_1_17 | 19959 | 20918 | + | 3.A.1.2.17 |
| pfam | Rep_2603_c_1 | Rep_2603_c_1_18 | 21404 | 21610 | + | RbsD_FucU |
| CAZyme | Rep_2603_c_1 | Rep_2603_c_1_19 | 21607 | 23802 | + | GH95 |
Gene ID: Rep_2603_c_1_15
Type: TC
Location: 17025 - 18806 (+)
Type: TC
Location: 17025 - 18806 (+)
Gene ID: Rep_2603_c_1_16
Type: TC
Location: 18808 - 19959 (+)
Type: TC
Location: 18808 - 19959 (+)
Gene ID: Rep_2603_c_1_17
Type: TC
Location: 19959 - 20918 (+)
Type: TC
Location: 19959 - 20918 (+)
Gene ID: Rep_2603_c_1_18
Type: pfam
Location: 21404 - 21610 (+)
Type: pfam
Location: 21404 - 21610 (+)
Gene ID: Rep_2603_c_1_19
Type: CAZyme
Location: 21607 - 23802 (+)
Type: CAZyme
Location: 21607 - 23802 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp900554085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.