Cluster: Rep_2602_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2602
- CGC Family ID: CGCFAM_00377
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2602_c_65 | Rep_2602_c_65_2 | 1194 | 2840 | + | 2.A.66.1.33 |
| NULL(UNKNOWN) | Rep_2602_c_65 | Rep_2602_c_65_3 | 2959 | 3534 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2602_c_65 | Rep_2602_c_65_4 | 3626 | 6175 | + | GH2 |
| TC | Rep_2602_c_65 | Rep_2602_c_65_5 | 6565 | 9210 | + | 3.A.3.5.15 |
Gene ID: Rep_2602_c_65_2
Type: TC
Location: 1194 - 2840 (+)
Type: TC
Location: 1194 - 2840 (+)
Gene ID: Rep_2602_c_65_3
Type:
Location: 2959 - 3534 (-)
Type:
Location: 2959 - 3534 (-)
Gene ID: Rep_2602_c_65_4
Type: CAZyme
Location: 3626 - 6175 (+)
Type: CAZyme
Location: 3626 - 6175 (+)
Gene ID: Rep_2602_c_65_5
Type: TC
Location: 6565 - 9210 (+)
Type: TC
Location: 6565 - 9210 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp944358385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.