Cluster: Rep_2602_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2602
- CGC Family ID: CGCFAM_01463
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2602_c_50 | Rep_2602_c_50_3 | 2271 | 3800 | + | GH77 |
| NULL(UNKNOWN) | Rep_2602_c_50 | Rep_2602_c_50_4 | 3797 | 4306 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2602_c_50 | Rep_2602_c_50_5 | 4376 | 4615 | + | PP-binding |
| TC | Rep_2602_c_50 | Rep_2602_c_50_6 | 4785 | 5714 | + | 3.A.1.105.3 |
Gene ID: Rep_2602_c_50_3
Type: CAZyme
Location: 2271 - 3800 (+)
Type: CAZyme
Location: 2271 - 3800 (+)
Gene ID: Rep_2602_c_50_4
Type:
Location: 3797 - 4306 (+)
Type:
Location: 3797 - 4306 (+)
Gene ID: Rep_2602_c_50_5
Type: pfam
Location: 4376 - 4615 (+)
Type: pfam
Location: 4376 - 4615 (+)
Gene ID: Rep_2602_c_50_6
Type: TC
Location: 4785 - 5714 (+)
Type: TC
Location: 4785 - 5714 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp944358385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.