Cluster: Rep_2602_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2602
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2602_c_46 | Rep_2602_c_46_4 | 3500 | 5176 | + | CBM34 | GH13_20 |
| STP | Rep_2602_c_46 | Rep_2602_c_46_5 | 5173 | 6630 | + | SBP_bac_1 |
| TC | Rep_2602_c_46 | Rep_2602_c_46_6 | 6651 | 8057 | + | 3.A.1.1.27 |
| TC | Rep_2602_c_46 | Rep_2602_c_46_7 | 8054 | 8914 | + | 3.A.1.1.27 |
| TC | Rep_2602_c_46 | Rep_2602_c_46_8 | 8925 | 10700 | + | 3.A.1.1.22 |
Gene ID: Rep_2602_c_46_4
Type: CAZyme
Location: 3500 - 5176 (+)
Type: CAZyme
Location: 3500 - 5176 (+)
Gene ID: Rep_2602_c_46_5
Type: STP
Location: 5173 - 6630 (+)
Type: STP
Location: 5173 - 6630 (+)
Gene ID: Rep_2602_c_46_6
Type: TC
Location: 6651 - 8057 (+)
Type: TC
Location: 6651 - 8057 (+)
Gene ID: Rep_2602_c_46_7
Type: TC
Location: 8054 - 8914 (+)
Type: TC
Location: 8054 - 8914 (+)
Gene ID: Rep_2602_c_46_8
Type: TC
Location: 8925 - 10700 (+)
Type: TC
Location: 8925 - 10700 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp944358385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.