Cluster: Rep_2602_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2602
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2602_c_42 | Rep_2602_c_42_13 | 12447 | 13220 | + | CE4 |
| pfam | Rep_2602_c_42 | Rep_2602_c_42_14 | 13256 | 13888 | + | SSB |
| CAZyme | Rep_2602_c_42 | Rep_2602_c_42_15 | 14140 | 15822 | + | GH36 |
| pfam | Rep_2602_c_42 | Rep_2602_c_42_16 | 15822 | 16514 | + | Ala_racemase_N |
| pfam | Rep_2602_c_42 | Rep_2602_c_42_17 | 16522 | 16926 | + | SepF |
| TC | Rep_2602_c_42 | Rep_2602_c_42_18 | 16923 | 17801 | + | 9.B.105.1.5 |
Gene ID: Rep_2602_c_42_13
Type: CAZyme
Location: 12447 - 13220 (+)
Type: CAZyme
Location: 12447 - 13220 (+)
Gene ID: Rep_2602_c_42_14
Type: pfam
Location: 13256 - 13888 (+)
Type: pfam
Location: 13256 - 13888 (+)
Gene ID: Rep_2602_c_42_15
Type: CAZyme
Location: 14140 - 15822 (+)
Type: CAZyme
Location: 14140 - 15822 (+)
Gene ID: Rep_2602_c_42_16
Type: pfam
Location: 15822 - 16514 (+)
Type: pfam
Location: 15822 - 16514 (+)
Gene ID: Rep_2602_c_42_17
Type: pfam
Location: 16522 - 16926 (+)
Type: pfam
Location: 16522 - 16926 (+)
Gene ID: Rep_2602_c_42_18
Type: TC
Location: 16923 - 17801 (+)
Type: TC
Location: 16923 - 17801 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp944358385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.