Cluster: Rep_2600_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2600
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2600_c_27 | Rep_2600_c_27_2 | 754 | 2529 | - | 3.A.1.1.22 |
| TC | Rep_2600_c_27 | Rep_2600_c_27_3 | 2540 | 3400 | - | 3.A.1.1.27 |
| TC | Rep_2600_c_27 | Rep_2600_c_27_4 | 3397 | 4803 | - | 3.A.1.1.27 |
| STP | Rep_2600_c_27 | Rep_2600_c_27_5 | 4824 | 6281 | - | SBP_bac_1 |
| CAZyme | Rep_2600_c_27 | Rep_2600_c_27_6 | 6278 | 7954 | - | CBM34 | GH13_20 |
Gene ID: Rep_2600_c_27_2
Type: TC
Location: 754 - 2529 (-)
Type: TC
Location: 754 - 2529 (-)
Gene ID: Rep_2600_c_27_3
Type: TC
Location: 2540 - 3400 (-)
Type: TC
Location: 2540 - 3400 (-)
Gene ID: Rep_2600_c_27_4
Type: TC
Location: 3397 - 4803 (-)
Type: TC
Location: 3397 - 4803 (-)
Gene ID: Rep_2600_c_27_5
Type: STP
Location: 4824 - 6281 (-)
Type: STP
Location: 4824 - 6281 (-)
Gene ID: Rep_2600_c_27_6
Type: CAZyme
Location: 6278 - 7954 (-)
Type: CAZyme
Location: 6278 - 7954 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp944372795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.