Cluster: Rep_2600_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2600
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2600_c_14 | Rep_2600_c_14_2 | 1040 | 1960 | - | 3.A.1.105.3 |
| TC | Rep_2600_c_14 | Rep_2600_c_14_3 | 2155 | 2394 | - | 3.D.1.6.4 |
| NULL(UNKNOWN) | Rep_2600_c_14 | Rep_2600_c_14_4 | 2474 | 2983 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2600_c_14 | Rep_2600_c_14_5 | 2980 | 4509 | - | GH77 |
Gene ID: Rep_2600_c_14_2
Type: TC
Location: 1040 - 1960 (-)
Type: TC
Location: 1040 - 1960 (-)
Gene ID: Rep_2600_c_14_3
Type: TC
Location: 2155 - 2394 (-)
Type: TC
Location: 2155 - 2394 (-)
Gene ID: Rep_2600_c_14_4
Type:
Location: 2474 - 2983 (-)
Type:
Location: 2474 - 2983 (-)
Gene ID: Rep_2600_c_14_5
Type: CAZyme
Location: 2980 - 4509 (-)
Type: CAZyme
Location: 2980 - 4509 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp944372795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.