Cluster: Rep_2599_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2599
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2599_c_81 | Rep_2599_c_81_5 | 5437 | 7602 | + | GH31_15 |
| pfam | Rep_2599_c_81 | Rep_2599_c_81_6 | 8068 | 8532 | + | Ribosomal_L13 |
| pfam | Rep_2599_c_81 | Rep_2599_c_81_7 | 8547 | 8963 | + | Ribosomal_S9 |
| TC | Rep_2599_c_81 | Rep_2599_c_81_8 | 9749 | 10450 | + | 3.A.1.122.14 |
Gene ID: Rep_2599_c_81_5
Type: CAZyme
Location: 5437 - 7602 (+)
Type: CAZyme
Location: 5437 - 7602 (+)
Gene ID: Rep_2599_c_81_6
Type: pfam
Location: 8068 - 8532 (+)
Type: pfam
Location: 8068 - 8532 (+)
Gene ID: Rep_2599_c_81_7
Type: pfam
Location: 8547 - 8963 (+)
Type: pfam
Location: 8547 - 8963 (+)
Gene ID: Rep_2599_c_81_8
Type: TC
Location: 9749 - 10450 (+)
Type: TC
Location: 9749 - 10450 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.