Cluster: Rep_2599_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2599
- CGC Family ID: CGCFAM_00038
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2599_c_30 | Rep_2599_c_30_17 | 16750 | 17424 | + | 9.B.18.1.1 |
| CAZyme | Rep_2599_c_30 | Rep_2599_c_30_18 | 17431 | 18585 | + | GT4 |
| CAZyme | Rep_2599_c_30 | Rep_2599_c_30_19 | 18578 | 19456 | + | GT111 |
| TC | Rep_2599_c_30 | Rep_2599_c_30_20 | 19469 | 20278 | - | 3.A.1.103.1 |
Gene ID: Rep_2599_c_30_17
Type: TC
Location: 16750 - 17424 (+)
Type: TC
Location: 16750 - 17424 (+)
Gene ID: Rep_2599_c_30_18
Type: CAZyme
Location: 17431 - 18585 (+)
Type: CAZyme
Location: 17431 - 18585 (+)
Gene ID: Rep_2599_c_30_19
Type: CAZyme
Location: 18578 - 19456 (+)
Type: CAZyme
Location: 18578 - 19456 (+)
Gene ID: Rep_2599_c_30_20
Type: TC
Location: 19469 - 20278 (-)
Type: TC
Location: 19469 - 20278 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.