Cluster: Rep_2599_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2599
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2599_c_25 | Rep_2599_c_25_9 | 13469 | 14398 | - | CE4 |
| TC | Rep_2599_c_25 | Rep_2599_c_25_10 | 14548 | 15432 | + | 3.A.1.7.5 |
| TC | Rep_2599_c_25 | Rep_2599_c_25_11 | 15571 | 16407 | + | 3.A.1.7.5 |
| TC | Rep_2599_c_25 | Rep_2599_c_25_12 | 16404 | 17339 | + | 3.A.1.7.5 |
| TC | Rep_2599_c_25 | Rep_2599_c_25_13 | 17339 | 18142 | + | 3.A.1.7.5 |
Gene ID: Rep_2599_c_25_9
Type: CAZyme
Location: 13469 - 14398 (-)
Type: CAZyme
Location: 13469 - 14398 (-)
Gene ID: Rep_2599_c_25_10
Type: TC
Location: 14548 - 15432 (+)
Type: TC
Location: 14548 - 15432 (+)
Gene ID: Rep_2599_c_25_11
Type: TC
Location: 15571 - 16407 (+)
Type: TC
Location: 15571 - 16407 (+)
Gene ID: Rep_2599_c_25_12
Type: TC
Location: 16404 - 17339 (+)
Type: TC
Location: 16404 - 17339 (+)
Gene ID: Rep_2599_c_25_13
Type: TC
Location: 17339 - 18142 (+)
Type: TC
Location: 17339 - 18142 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.