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Cluster: Rep_2587_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2587_c_146 Rep_2587_c_146_1 2 646 - GT32
CAZyme Rep_2587_c_146 Rep_2587_c_146_2 643 1545 - GT2
CAZyme Rep_2587_c_146 Rep_2587_c_146_3 1538 2293 - GT32
CAZyme Rep_2587_c_146 Rep_2587_c_146_4 2290 3054 - GT32
CAZyme Rep_2587_c_146 Rep_2587_c_146_5 3062 3985 - GT2
pfam Rep_2587_c_146 Rep_2587_c_146_6 3990 5162 - EpsG
CAZyme Rep_2587_c_146 Rep_2587_c_146_7 5163 6038 - GT2
CAZyme Rep_2587_c_146 Rep_2587_c_146_8 6057 7148 - GT4
pfam Rep_2587_c_146 Rep_2587_c_146_9 7168 8013 - 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10
TC Rep_2587_c_146 Rep_2587_c_146_10 8010 9053 - 9.B.18.1.2
Gene ID: Rep_2587_c_146_1
Type: CAZyme
Location: 2 - 646 (-)
Gene ID: Rep_2587_c_146_2
Type: CAZyme
Location: 643 - 1545 (-)
Gene ID: Rep_2587_c_146_3
Type: CAZyme
Location: 1538 - 2293 (-)
Gene ID: Rep_2587_c_146_4
Type: CAZyme
Location: 2290 - 3054 (-)
Gene ID: Rep_2587_c_146_5
Type: CAZyme
Location: 3062 - 3985 (-)
Gene ID: Rep_2587_c_146_6
Type: pfam
Location: 3990 - 5162 (-)
Gene ID: Rep_2587_c_146_7
Type: CAZyme
Location: 5163 - 6038 (-)
Gene ID: Rep_2587_c_146_8
Type: CAZyme
Location: 6057 - 7148 (-)
Gene ID: Rep_2587_c_146_9
Type: pfam
Location: 7168 - 8013 (-)
Gene ID: Rep_2587_c_146_10
Type: TC
Location: 8010 - 9053 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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