Cluster: Rep_2587_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2587
- CGC Family ID: CGCFAM_09762
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2587_c_117 | Rep_2587_c_117_1 | 177 | 2225 | - | 3.A.1.135.6 |
| TC | Rep_2587_c_117 | Rep_2587_c_117_2 | 2222 | 3985 | - | 3.A.1.135.6 |
| TF | Rep_2587_c_117 | Rep_2587_c_117_3 | 3978 | 4436 | - | MarR |
| STP | Rep_2587_c_117 | Rep_2587_c_117_4 | 4741 | 6627 | - | HATPase_c |
| CAZyme | Rep_2587_c_117 | Rep_2587_c_117_5 | 6868 | 8859 | - | CBM67 | GH78 |
| CAZyme | Rep_2587_c_117 | Rep_2587_c_117_6 | 9148 | 12006 | - | GH2 |
Gene ID: Rep_2587_c_117_1
Type: TC
Location: 177 - 2225 (-)
Type: TC
Location: 177 - 2225 (-)
Gene ID: Rep_2587_c_117_2
Type: TC
Location: 2222 - 3985 (-)
Type: TC
Location: 2222 - 3985 (-)
Gene ID: Rep_2587_c_117_3
Type: TF
Location: 3978 - 4436 (-)
Type: TF
Location: 3978 - 4436 (-)
Gene ID: Rep_2587_c_117_4
Type: STP
Location: 4741 - 6627 (-)
Type: STP
Location: 4741 - 6627 (-)
Gene ID: Rep_2587_c_117_5
Type: CAZyme
Location: 6868 - 8859 (-)
Type: CAZyme
Location: 6868 - 8859 (-)
Gene ID: Rep_2587_c_117_6
Type: CAZyme
Location: 9148 - 12006 (-)
Type: CAZyme
Location: 9148 - 12006 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp944363615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.