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Cluster: Rep_257_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_257_c_32 Rep_257_c_32_7 5759 6757 - GT10
CAZyme Rep_257_c_32 Rep_257_c_32_8 6754 7767 - GT113
pfam Rep_257_c_32 Rep_257_c_32_9 7764 8531 - Kdo
CAZyme Rep_257_c_32 Rep_257_c_32_10 8545 9327 - GT2
CAZyme Rep_257_c_32 Rep_257_c_32_11 9532 10614 + GT2
CAZyme Rep_257_c_32 Rep_257_c_32_12 10642 11658 + GT2
CAZyme Rep_257_c_32 Rep_257_c_32_13 11662 12636 - GT2
CAZyme Rep_257_c_32 Rep_257_c_32_14 12797 13711 + GT2
pfam Rep_257_c_32 Rep_257_c_32_15 13729 14649 - Lip_A_acyltrans
TC Rep_257_c_32 Rep_257_c_32_16 14700 16538 - 3.A.1.106.1
Gene ID: Rep_257_c_32_7
Type: CAZyme
Location: 5759 - 6757 (-)
Gene ID: Rep_257_c_32_8
Type: CAZyme
Location: 6754 - 7767 (-)
Gene ID: Rep_257_c_32_9
Type: pfam
Location: 7764 - 8531 (-)
Gene ID: Rep_257_c_32_10
Type: CAZyme
Location: 8545 - 9327 (-)
Gene ID: Rep_257_c_32_11
Type: CAZyme
Location: 9532 - 10614 (+)
Gene ID: Rep_257_c_32_12
Type: CAZyme
Location: 10642 - 11658 (+)
Gene ID: Rep_257_c_32_13
Type: CAZyme
Location: 11662 - 12636 (-)
Gene ID: Rep_257_c_32_14
Type: CAZyme
Location: 12797 - 13711 (+)
Gene ID: Rep_257_c_32_15
Type: pfam
Location: 13729 - 14649 (-)
Gene ID: Rep_257_c_32_16
Type: TC
Location: 14700 - 16538 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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