Cluster: Rep_257_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_257
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_257_c_15 | Rep_257_c_15_9 | 11081 | 11857 | - | GT2 |
| CAZyme | Rep_257_c_15 | Rep_257_c_15_10 | 11854 | 13128 | - | GT4 |
| pfam | Rep_257_c_15 | Rep_257_c_15_11 | 13524 | 14000 | - | YgbB |
| TC | Rep_257_c_15 | Rep_257_c_15_12 | 14075 | 15250 | - | 1.B.57.4.6 |
Gene ID: Rep_257_c_15_9
Type: CAZyme
Location: 11081 - 11857 (-)
Type: CAZyme
Location: 11081 - 11857 (-)
Gene ID: Rep_257_c_15_10
Type: CAZyme
Location: 11854 - 13128 (-)
Type: CAZyme
Location: 11854 - 13128 (-)
Gene ID: Rep_257_c_15_11
Type: pfam
Location: 13524 - 14000 (-)
Type: pfam
Location: 13524 - 14000 (-)
Gene ID: Rep_257_c_15_12
Type: TC
Location: 14075 - 15250 (-)
Type: TC
Location: 14075 - 15250 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.