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Cluster: Rep_257_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_257_c_196 Rep_257_c_196_37 46679 49021 - GH30_3
pfam Rep_257_c_196 Rep_257_c_196_38 49037 50416 - DUF5016 | DUF5125 | DUF5121
CAZyme Rep_257_c_196 Rep_257_c_196_39 50438 51955 - GH30_3
pfam Rep_257_c_196 Rep_257_c_196_40 51984 53519 - SusD_RagB | SusD-like_3
TC Rep_257_c_196 Rep_257_c_196_41 53577 56558 - 1.B.14.6.1
pfam Rep_257_c_196 Rep_257_c_196_42 56831 58468 + DUF6377
pfam Rep_257_c_196 Rep_257_c_196_43 58461 60689 - ASD1_dom
TC Rep_257_c_196 Rep_257_c_196_44 60740 61714 - 2.A.28.2.4
CAZyme Rep_257_c_196 Rep_257_c_196_45 61924 63354 + GH13_28
Gene ID: Rep_257_c_196_37
Type: CAZyme
Location: 46679 - 49021 (-)
Gene ID: Rep_257_c_196_38
Type: pfam
Location: 49037 - 50416 (-)
Gene ID: Rep_257_c_196_39
Type: CAZyme
Location: 50438 - 51955 (-)
Gene ID: Rep_257_c_196_40
Type: pfam
Location: 51984 - 53519 (-)
Gene ID: Rep_257_c_196_41
Type: TC
Location: 53577 - 56558 (-)
Gene ID: Rep_257_c_196_42
Type: pfam
Location: 56831 - 58468 (+)
Gene ID: Rep_257_c_196_43
Type: pfam
Location: 58461 - 60689 (-)
Gene ID: Rep_257_c_196_44
Type: TC
Location: 60740 - 61714 (-)
Gene ID: Rep_257_c_196_45
Type: CAZyme
Location: 61924 - 63354 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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