dbCAN Logo

Cluster: Rep_2546_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2546_c_42 Rep_2546_c_42_92 108894 109868 + 8.A.5.1.3
CAZyme Rep_2546_c_42 Rep_2546_c_42_93 110045 112636 - GH51_2
TC Rep_2546_c_42 Rep_2546_c_42_94 112824 115532 - 3.A.3.4.1
peptidase Rep_2546_c_42 Rep_2546_c_42_95 116018 116917 - S33.UPW
CAZyme Rep_2546_c_42 Rep_2546_c_42_96 117056 118093 + GT28
pfam Rep_2546_c_42 Rep_2546_c_42_97 118132 118929 - Lactamase_B
STP Rep_2546_c_42 Rep_2546_c_42_98 119017 120084 - SIS | SIS
CAZyme Rep_2546_c_42 Rep_2546_c_42_99 120100 121704 - GH20
Gene ID: Rep_2546_c_42_92
Type: TC
Location: 108894 - 109868 (+)
Gene ID: Rep_2546_c_42_93
Type: CAZyme
Location: 110045 - 112636 (-)
Gene ID: Rep_2546_c_42_94
Type: TC
Location: 112824 - 115532 (-)
Gene ID: Rep_2546_c_42_95
Type: peptidase
Location: 116018 - 116917 (-)
Gene ID: Rep_2546_c_42_96
Type: CAZyme
Location: 117056 - 118093 (+)
Gene ID: Rep_2546_c_42_97
Type: pfam
Location: 118132 - 118929 (-)
Gene ID: Rep_2546_c_42_98
Type: STP
Location: 119017 - 120084 (-)
Gene ID: Rep_2546_c_42_99
Type: CAZyme
Location: 120100 - 121704 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List