Cluster: Rep_2546_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2546
- CGC Family ID: CGCFAM_09792
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2546_c_42 | Rep_2546_c_42_37 | 45211 | 45993 | - | 3.A.2.1.5 |
| pfam | Rep_2546_c_42 | Rep_2546_c_42_38 | 46266 | 46724 | + | bPH_4 |
| pfam | Rep_2546_c_42 | Rep_2546_c_42_39 | 46933 | 47463 | - | Rubrerythrin |
| CAZyme | Rep_2546_c_42 | Rep_2546_c_42_40 | 47803 | 48774 | + | GH43_26 |
Gene ID: Rep_2546_c_42_37
Type: TC
Location: 45211 - 45993 (-)
Type: TC
Location: 45211 - 45993 (-)
Gene ID: Rep_2546_c_42_38
Type: pfam
Location: 46266 - 46724 (+)
Type: pfam
Location: 46266 - 46724 (+)
Gene ID: Rep_2546_c_42_39
Type: pfam
Location: 46933 - 47463 (-)
Type: pfam
Location: 46933 - 47463 (-)
Gene ID: Rep_2546_c_42_40
Type: CAZyme
Location: 47803 - 48774 (+)
Type: CAZyme
Location: 47803 - 48774 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia excrementipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2546_c_42_39 | vegetarian > vegan | 1.76049 | 0.03161 |