Cluster: Rep_2546_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2546
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2546_c_38 | Rep_2546_c_38_6 | 5565 | 6524 | + | 3.A.1.1.34 |
| TC | Rep_2546_c_38 | Rep_2546_c_38_7 | 6524 | 7378 | + | 3.A.1.1.20 |
| pfam | Rep_2546_c_38 | Rep_2546_c_38_8 | 7402 | 8316 | + | IU_nuc_hydro |
| CAZyme | Rep_2546_c_38 | Rep_2546_c_38_9 | 8326 | 10572 | + | GH106 |
| NULL(UNKNOWN) | Rep_2546_c_38 | Rep_2546_c_38_10 | 10589 | 13129 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2546_c_38 | Rep_2546_c_38_11 | 13144 | 15264 | + | GH78 |
Gene ID: Rep_2546_c_38_6
Type: TC
Location: 5565 - 6524 (+)
Type: TC
Location: 5565 - 6524 (+)
Gene ID: Rep_2546_c_38_7
Type: TC
Location: 6524 - 7378 (+)
Type: TC
Location: 6524 - 7378 (+)
Gene ID: Rep_2546_c_38_8
Type: pfam
Location: 7402 - 8316 (+)
Type: pfam
Location: 7402 - 8316 (+)
Gene ID: Rep_2546_c_38_9
Type: CAZyme
Location: 8326 - 10572 (+)
Type: CAZyme
Location: 8326 - 10572 (+)
Gene ID: Rep_2546_c_38_10
Type:
Location: 10589 - 13129 (+)
Type:
Location: 10589 - 13129 (+)
Gene ID: Rep_2546_c_38_11
Type: CAZyme
Location: 13144 - 15264 (+)
Type: CAZyme
Location: 13144 - 15264 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia excrementipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.